BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB013E02LP1|AL426527
(847 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1802 1655 0.0
>3x_Contig1802
Length = 45229
Score = 1655 bits (834), Expect = 0.0
Identities = 844/847 (99%), Gaps = 1/847 (0%)
Strand = Plus / Minus
Query: 1 tccactcttaattctaaatctgtagtagtaaatctagtaacaaggtccttataagcttca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10407 tccactcttaattctaaatctgtagtagtaaatctagtaacaaggtccttataagcttca 10348
Query: 61 gtatcgtcacaacgttttaatgttgataattttaccatcaaaaaaggtgctatcaatggt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10347 gtatcgtcacaacgttttaatgttgataattttaccatcaaaaaaggtgctatcaatggt 10288
Query: 121 cgtttggataatgaaattctgatgaaccaatgtgatatgatctgatacgatagtgtcaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10287 cgtttggataatgaaattctgatgaaccaatgtgatatgatctgatacgatagtgtcaga 10228
Query: 181 taaaaatgtgccatttgtttggtgacagtaaaactactggtagatggattgaaagatgct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10227 taaaaatgtgccatttgtttggtgacagtaaaactactggtagatggattgaaagatgct 10168
Query: 241 tcctgttcatctgtaaatgagtgtcgcacaaaatccgcttcttcagcctcctctttcaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10167 tcctgttcatctgtaaatgagtgtcgcacaaaatccgcttcttcagcctcctctttcaaa 10108
Query: 301 tcatgcgatacttcgatcaatttgaatgcaatgntaaacacacgcttcaattgatcaatt 360
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 10107 tcatgcgatacttcgatcaatttgaatgcaatggtaaacacacgcttcaattgatcaatt 10048
Query: 361 gttaatggagaaataatctgtggggaatctgataaggcaattaaaaattcaagtaaacag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10047 gttaatggagaaataatctgtggggaatctgataaggcaattaaaaattcaagtaaacag 9988
Query: 421 ggtatagcttgctttttcgttaatcttatcgagattgtctctaaaagtggattcaaatgt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9987 ggtatagcttgctttttcgttaatcttatcgagattgtctctaaaagtggattcaaatgt 9928
Query: 481 ttcttaatggaagaagggatttcgtaacatgaaacactaaaattatgcaataaggggaca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9927 ttcttaatggaagaagggatttcgtaacatgaaacactaaaattatgcaataaggggaca 9868
Query: 541 attgtcttctcaaatgatgattctaaaacacctaatgaaatcttaatcatttcatcagcc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9867 attgtcttctcaaatgatgattctaaaacacctaatgaaatcttaatcatttcatcagcc 9808
Query: 601 ttgctctttcccaaaaacccataatatggaaacaatgaggatagtgtccttacaaaagca 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9807 ttgctctttcccaaaaacccataatatggaaacaatgaggatagtgtccttacaaaagca 9748
Query: 661 agttgaacgtcacttttattgwtcccaacacccatctttattgggcatccatccttttaa 720
||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||
Sbjct: 9747 agttgaacgtcacttttattgatcccaacacccatctttattgggcatccatcc-tttaa 9689
Query: 721 ttgatgtaaaataaggtcatgtaatatttcaatattgtgtctatcatttttgaaaagatg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9688 ttgatgtaaaataaggtcatgtaatatttcaatattgtgtctatcatttttgaaaagatg 9629
Query: 781 ataattagccaactgcggacataaatgagaaagtagatacgtgtacaattcccagtcaag 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9628 ataattagccaactgcggacataaatgagaaagtagatacgtgtacaattcccagtcaag 9569
Query: 841 aggtttt 847
|||||||
Sbjct: 9568 aggtttt 9562
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7618
Number of Sequences: 1807
Number of extensions: 7618
Number of successful extensions: 53
Number of sequences better than 1.0e-20: 1
length of query: 847
length of database: 10,358,551
effective HSP length: 16
effective length of query: 831
effective length of database: 10,329,639
effective search space: 8583930009
effective search space used: 8583930009
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)